CDR Tickets

Issue Number 3458
Summary Drug terms without active links to the NCI Thesaurus
Created 2011-12-01 12:02:17
Issue Type Improvement
Submitted By Osei-Poku, William (NIH/NCI) [C]
Assigned To Osei-Poku, William (NIH/NCI) [C]
Status Closed
Resolved 2012-01-19 10:56:01
Resolution Fixed
Path /home/bkline/backups/jira/ocecdr/issue.107786
Description

BZISSUE::5152
BZDATETIME::2011-12-01 12:02:17
BZCREATOR::William Osei-Poku
BZASSIGNEE::William Osei-Poku
BZQACONTACT::William Osei-Poku

There are some drug terms in the NCI Drug dictionary that appear to have live links to the NCI thesaurus but when you click on the link, you get an error page.
This is because the concept codes in the CDR documents are not stored where the publishing filters can find them;
/Term/OtherName/SourceInformation/VocabularySource/SourceTermId

In most cases, we enter the concept code here: /Term/NCIThesaurusConcept. Volker created an ad hoc query which identified 161 drug records that do not have concept codes where the publishing filters could find them. It means that all of these terms will not have active links to the Thesaurus. I propose that we modify the publishing filters to also look for concept codes in the following path /Term/NCIThesaurusConcept. That is, if the code is not present in the following existing path = /Term/OtherName/SourceInformation/VocabularySource/SourceTermId, the filters should look for the code in the 'new' path /Term/NCIThesaurusConcept.

Comment entered 2011-12-02 12:21:07 by Osei-Poku, William (NIH/NCI) [C]

BZDATETIME::2011-12-02 12:21:07
BZCOMMENTOR::William Osei-Poku
BZCOMMENT::1

I am re-assigning this issue to myself. I will close it when all the terms have been updated with the concept codes within the Other Name block.

Comment entered 2012-01-19 10:55:31 by Osei-Poku, William (NIH/NCI) [C]

BZDATETIME::2012-01-19 10:55:31
BZCOMMENTOR::William Osei-Poku
BZCOMMENT::2

(In reply to comment #1)
> I am re-assigning this issue to myself. I will close it when all the terms have
> been updated with the concept codes within the Other Name block.
Mary has finished adding the NCiT ids. I am marking this issue as Resolved.

Comment entered 2012-01-19 10:56:01 by Osei-Poku, William (NIH/NCI) [C]

BZDATETIME::2012-01-19 10:56:01
BZCOMMENTOR::William Osei-Poku
BZCOMMENT::3

Issue closed.

Elapsed: 0:00:00.001397