EBMS Tickets

Issue Number 540
Summary [Reports] New Citations by Tag Report
Created 2020-02-06 10:38:21
Issue Type Improvement
Submitted By Juthe, Robin (NIH/NCI) [E]
Assigned To Kline, Bob (NIH/NCI) [C]
Status Closed
Resolved 2020-03-02 13:24:18
Resolution Fixed
Path /home/bkline/backups/jira/oceebms/issue.256268
Description

We would like to create a new report called the Citations by Tag report. This will help us keep track of high priority citations and core journal citations, for example.

 

I will attach specs for the new report.

Comment entered 2020-02-06 13:56:02 by Juthe, Robin (NIH/NCI) [E]

Bob will look into the feasibility of excluding system-generated comments from the column of the report (e.g., those that begin with "state inactivated by..." and probably others).

Comment entered 2020-02-25 09:25:22 by Juthe, Robin (NIH/NCI) [E]

As we just discussed, we'd like to limit the selected tags in this report to those that are applied at the topic level (as opposed to the citation level). 

 

Please keep this report on the menus for medical librarians as well.

Comment entered 2020-02-25 19:16:45 by Kline, Bob (NIH/NCI) [C]

For articles that are at the Assigned for Review state, if a Board Manager Comment exists, please add the words BOARD MANAGER COMMENT in red beneath the status description.

There is no Assigned for Review state. Did you mean the Passed full text review state?

Comment entered 2020-02-26 09:30:27 by Kline, Bob (NIH/NCI) [C]

I went ahead and implemented the report that way. Here are the sub-strings I'm using to suppress machine-generated comments. Any comment which starts with one of these sub-strings (ignoring case) will be dropped from the report. Let me know if you need would like me to make any changes to the list.
 

    // Beginning of comments we want to avoid reporting.
    $machine_comments = array(
        'status entered by conversion because the topic/article combination',
        'published state added as a result of setting the state for this',
        'tir 2506 (',
        'published as part of import from core journals',
        'core journals search',
        'delete this journal',
        'state inactivated by setting "published" at',
    );
Comment entered 2020-02-26 09:37:37 by Juthe, Robin (NIH/NCI) [E]

Sorry, I was thinking Assigned for Review was a state. What I meant by that value is articles have been included in a packet for a Board member to review but haven't made it past that point (similar to the results that we see on the Articles Without Responses report). Is it possible to treat that as a state?

Comment entered 2020-02-26 09:46:30 by Kline, Bob (NIH/NCI) [C]

It's possible but somewhat complicated. Would there be any downside to having the report indicate the presence of manager comments for article/topic combinations which are in the Passed full text review state without figuring out whether the reviews have been assigned yet and whether any of the reviews have been submitted?

Comment entered 2020-02-27 10:34:34 by Juthe, Robin (NIH/NCI) [E]

Let's discuss this today. I'm not sure if I understand your question.

Comment entered 2020-03-02 11:00:08 by Juthe, Robin (NIH/NCI) [E]

I don't think we discussed this explicitly in the meeting last week, but if I understand correctly, I don't think there would be any downsides to seeing the presence of a board manager comment regardless of whether it had been included in a packet. The primary purpose of those comments is to tell our Board members something at the time of their review. Sometimes we might add the comment when we first see the paper and other times we might add the comment at the time we are adding the paper to a packet.

Comment entered 2020-03-02 11:56:49 by Juthe, Robin (NIH/NCI) [E]

While it's preferable to show "Assigned for Review" as a "state", I think we could postpone that to the next release to keep to our schedule.

 

However, would it be possible to sort the results of this report by summary topic?

Comment entered 2020-03-02 12:03:52 by Juthe, Robin (NIH/NCI) [E]

And could you please filter out comments that begin with "state inactivated by setting" (a more general version of the comments you are already filtering out)? There are several other possible permutations of that comment that could be removed so this shorter string should catch the others. Thank you.

Comment entered 2020-03-02 13:24:18 by Kline, Bob (NIH/NCI) [C]

Additional requirements implemented.

Comment entered 2020-03-02 14:01:48 by Juthe, Robin (NIH/NCI) [E]

Verified on DEV. Thanks!

Comment entered 2020-03-12 13:12:53 by Juthe, Robin (NIH/NCI) [E]

Verified on QA.

Comment entered 2020-03-17 17:17:10 by Juthe, Robin (NIH/NCI) [E]

Verified on PROD.

Attachments
File Name Posted User
Citations by Tag Report Specs for JIRA.docx 2020-02-06 10:54:39 Juthe, Robin (NIH/NCI) [E]

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