CDR Tickets

For my information:  Adding the new SummaryTypes to this ticket.

• Overview

• Causes, Risk Factors, and Prevention

• Signs and Symptoms

• Prognosis

• Stages

• Diagnosis

I have a list of filters using the SummaryType value for processing.  In order to implement the "appropriate changes" I will need to know how the new types are being used.  For instance, we are adding clinical trial search paragraphs to treatment sections.  Does any of the new SummaryTypes need to be treated like a Treatment summary, or a Screening or IACT summary?

CDR797103 - Cancer Information Summary for Drupal CMS

The variable sType is populated with the SummaryType [cam, genetics, other] but the variable is never used.
To do:  Update filter to remove variable

CDR335424 - Denormalization Filter: Summary
CDR699063 - Denormalization Filter: Summary – QD

The variable sType is populated with the SummaryType [Treatment, Screening, Prevention, ... ]. Spanish summaries try to retrieve the PDQ Board based on the corresponding English version.  Since SVPC documents don't include a Board we're skipping over the denormalization.  If a board is included the document will fail.
To do:  No changes needed

CDR618263 - Denormalization Filter: Secondary Links

Filter creates a temporary element LinkedSummaryType that will be used in filter "InLine Markup Formatter" (see below)
To do: No changes needed

CDR339576 - Module: InLine Markup Formatter

Templates for SummaryRef and SummaryFragmentRef inspect LinkedSummaryType.  Create patient version of QC report link if the type is IACT.
To do:  Any special treatment for our new Summary types?

Templates for GlossaryTermRef and LOERef point to patient definition for the SummaryType = 'IACT'.
To do: Any special treatment for our new Summary types?

CDR000157 - Vendor Filter: Summary

• SummaryType = 'IACT', then select specific "For More Information" section

• SummaryType = 'IACT', then select specific "To Learn More" section (patient version)

• SummaryType = '[Treatment, Screening, Prevention, ... ]', then select specific "About PDQ" section

None of the above sections are added to the SVPC summaries.
To do:  No changed needed

Trialsearch: For the SummaryType = [Treatment, IACT, Supportive care] a type specific paragraph is added.
To do: Do we need to add trial search information for the new summary types?  If so, the document "Clinical Trial Search Link Text" will need to be updated.

The template GeneralInfoAdult is using the SummaryType information but this template isn't used anywhere.
To do:  Remove template GeneralInfoAdult

Template for Placeholder [BoardName, BoardNameLink, Adult_Treatment] are using the SummaryType information and processing text from "Get more information ..." but board names won't be included in SVPC documents.
To do: No changes needed.

After discussing the issue with Robin and Margaret, the decision was that none of the SVPC documents and none of the partner documents will have any additional sections/paragraphs added.  Those existing modifications to the content will only continue for our legacy documents.

I have made the required changes to the following filter:

• CDR000157.xml - Vendor Filter: Summary
   https://github.com/NCIOCPL/cdr-server/commit/9c8465a

I ran a diff report and confirmed that SVPC and partner documents have the extra sections stripped while legacy summaries continue to display the information.

Hi ~volker  Could you please clarify what I need to test here since from what you said above, I don't need to test SVPC summaries? I assume I need to test the legacy summaries but I don't know exactly what I need to test for the legacy summaries.

You should confirm that regardless of the SummaryType

• for legacy summaries: nothing has changed, i.e. the trial sections are still added to the treatment sections and the About PDQ, etc. sections are added

• for SVPC summaries: nothing gets added, no trial sections, no About PDQ, just the content from the CDR

• for partner summaries: nothing gets added, same as SVPC

• for partner summaries: nothing gets added, same as SVPC

I just ran the filter set for CDR0000256491, one of the partner summaries on DEV and I do a section for clinical trials. Is this what you're talking about?

Yes, this type of section is what I'm talking about.  However, the paragraph that you circled - in fact, the entire SummarySection - is part of the content of the document and not a section that has been added to the document during the filter process.  If it's in the document it won't get changed.

Here is an example of a legacy document that's been modified by the filter (CDR62970).  The top part shows the additional output placed there by the filter.  The bottom portion shows the document in XMetaL (not showing that section):

OK. Got it. Yes, that information is part of one of the SVPC summaries. The SVPC summaries and legacy documents and they all looked right to me. 

Verified on DEV. Thanks!